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User's Guide and Technical Documentation
KABAM Version 1.0
(Kow (based) Aquatic BioAccumulation Model)

Appendix I
References Cited

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Appendix I. References Cited

Acharya, K., Jack, J.D. and P.A. Bukaveckas. 2005. Dietary effects on life history traits of riverine Bosmina. 2005. Freshwater Biology, 50: 965-975.

Alsop, III, F.J. 2001a. Birds of North America: East. 1st edition. Smithsonian Handbooks. DK Publishing, Inc. New York.

Alsop, III, F.J. 2001b. Birds of North America: West. 1st edition. Smithsonian Handbooks. DK Publishing, Inc. New York.

Andrès, S., Baudrimont, M., Lapaquellerie, Y., Ribeyre, F., Maillet, N., Latouche, C. and A. Boudou. 1999. Field transplantation of the freshwater bivalve Crobicula fluminea along a polymetallic contamination gradient (River Lot, France): I. geochemical characteristics of the sampling sites and cadmium and zinc bioaccumulation kinetics. Environmental Toxicology and Chemistry, 18(11): 2462-2471.

Arnot, J.A. and F.A.P.C. Gobas. 2004. A food web bioaccumulation model for organic chemicals in aquatic ecosystems. Environmental Toxicology and Chemistry, 23 (10): 2343-2355.

Arnot, J.A., Macay, D. and M. Bonnell. 2008. Estimating metabolic biotransformation rates in fish from laboratory data. Environmental Toxicology and Chemistry, 27(2): 341-351.

Becker van Slooten, K. and J. Tarradellas. 1994. Accumulation, depuration and growth effects of tributyltin in the freshwater bivalve Dreissena polymorpha under field conditions. Environmental Toxicology and Chemistry, 13 (5): 755-762.

Beers, J.R. 1966. Studies on the chemical composition of the major zooplankton groups in the Sargasso Sea off Bermuda. Limnology and Oceanography, 11 (4): 520-528.

Beneski, J.T. and D.W. Stinson. 1987. Sorex palustris. Mammalian Species (Publication of the American Society of Mammalogists), No. 296, p. 1-6.

Bervoets, L., Voets, J., Covaci, A., Chu, S., Qadah, D., Smolders, R., Schepens, P. and R. Blust. 2005. Use of transplanted zebra mussels (Driessena polymorpha) to assess the bioavailability of microcontaminants in Flemish surface waters. Environmental Science and Technology, 39: 1492-1505.

Burkhard, L.P. 1998. Comparison of two models for predicting bioaccumulation of hydrophobic organic chemicals in a Great Lakes food web. Environmental Toxicology and Chemistry, 17 (3), 383-393.

Burkhard L.P., Endicott, D.D., Cook, P.M, Sappington, K.G., and E.L. Winchester. 2003. Evaluation of two methods for prediction of bioaccumulation factors. Environmental Science and Technology, 37:4626-4634.

Carr, K.H., Coyle, G.T. and R.A. Kimerle. 1997. Bioconcentration of [14C]butyl benzyl phthalate in bluegill sunfish (Lepomis macrochirus). Environmental Toxicology and Chemistry, 16 (10): 2200-2203.

Charlander, K.D. 1977. Handbook of freshwater fishery biology, Volume 2. The Iowa State University Press, Ames, IA.

Covich, A.P., Palmer, M.A. and T.A. Crowl. 1999. The role of benthic invertebrate species in freshwater ecosystems; zoobenthic species influence energy flows and nutrient cycling. BioScience, 49(2): 119-127.

Croce, V., De Angelis, S., Patrolecco, L., Pollesello, S., S. Valsecchi. 2005. Uptake and accumulation of sediment-associated 4-nonylphenol in a benthic invertebrate (Lumbriculus variegatus, freshwater oligochaete). Environmental Toxicology and Chemistry, 24 (5): 1165-1171.

Dunning, J.B. 1984. Body weights of 686 species of North American Birds. Western Bird Banding Association. Monograph number 1. May 1984.

Fischer, R.U., Congdon, J.D., Difonzo, C.D. and J.M. Aho. 1998. Lipid and reproductive cycles of bluegills (Lepomis macrochirus) exposed to 35 years of elevated environmental temperatures. Journal of Thermal Biology, 23 (6): 359-367.

Fisk, A.T., Wiens, S.C., Webster, G.R.B., Bergman, Å., D.C.G. Muir. 1998. Accumulation and depuration of sediment-sorbed C12 - and C16 - Polychlorinated alkanes by oligochaetes (Lumbriculus variegatus). Environmental Toxicology and Chemistry, 17 (10): 2019-2026.

Gewurtz, S.B., Lazar, R. and G.D. Haffner. 2000. Comparison of polycyclic aromatic hydrocarbon and polychlorinated biphenyl dynamics in benthic invertebrates of Lake Erie, USA. Environmental Toxicology and Chemistry, 19 (12): 2943-2950.

Gobas, F.A.P.C. 1993. A model for predicting the bioaccumulation of hydrophobic organic chemicals in aquatic food webs: application to Lake Ontario. Ecological Modeling, 69:1-17.

Hakwer, D.W. and D.W.Connell. 1988. Influence of partition coefficient of lipophilic compounds on bioconcentration kinetics with fish. Water Research, 22(6), 701-707.

Hannan, H.H. and T.C. Dorris. 1970. Succession of a macrophyte community in a constant temperature river. Limnology and Oceanography, 15(3), 442-453.

Hendriks, A.J, Pieters, H. and J. DeBoer. 1998. Accumulation of metals, polycyclic (halogenated) aromatic hydrocarbons, and biocides in zebra mussel and eel from the Rhine and Meuse Rivers. Environmental Toxicology and Chemistry, 17(10): 1885-1898.

Hyötyläinen, T., Karels, A. and A. Oikari. 2002. Assessment of bioavailability and effects of chemicals due to remediation actions with caging mussels (Anodonta anatina) at a creosote-contaminated lake sediment site. Water Research, 36: 4497-4504.

Jeppesen, E., Jensen, J.P., SØndergaard, M., Fenger-GrØn, M., Bramm, M.E., Sandby, K., MĜller, P.H., and H.U. Rasmussen. 2004. Impact of fish predation on cladoceran body weight distribution and zooplankton grazing in lakes during winter. Freshwater biology, 49, 432-447.

Jonker, M.T.O., Hoenderboom, A.M., and A.A. Koelmans. 2004. Effects of sedimentary sootlike materials on bioaccumulation and sorption of polychlorinated biphenyls. Environmental Toxicology and Chemistry, 23 (11): 2563-2570.

Kane Driscoll, S. and P.F. Landrum. 1997. A comparison of equilibrium partitioning and critical body residue approaches for predicting toxicity of sediment-associated fluoranthene to freshwater amphipods. Environmental Toxicology and Chemistry, 16 (10): 2179-2186.

Kane Driscoll, S., Harkey, G.A. and P.F. Landrum. 1997. Accumulation and toxicokinetics of fluoranthene in sediment bioassays with freshwater amphipods. Environmental Toxicology and Chemistry, 16 (4): 742-753.

Kang, Y.-S., Yamamuro, M., Masunaga, S. and J. Nakanishi. 2006. Specific biomagnification of polychlorinated dibenzo-p-dioxins and dibenzofurans in tufted ducks (Aythya fuligula), common cormorants (Phalacrocorax carbo) and their prey from Lake Shinji, Japan. Chemosphere, 46: 1373-1382.

Kay, D.P., Blankenship, A.L., Coady, K.K., Neigh, A.M., Zwiernik, M.J., Millsap, S.D., Strause, K., Park, C., Bradley, P., Newsted, J.L., Jones, P.D. and J.P. Giesy. 2005. Differential accumulation of polychlorinated biphenyl congeners in the aquatic food web at the Kalamazoo River superfund site, Michigan. Environmental Science and Technology, 39: 5964-5974.

Kukkonen, J., and P.F. Landrum. 1994. Toxicokinetics and toxicity of sediment-associated pyrene to Lumbriculus variegatus (oligochaeta). Environmental Toxicology and Chemistry, 13 (9): 1457-1468.

Kukkonen, J.V.K., Landrum, P.F., Mitra, S., Gossiaux, D.C., Gunnarsson, J. and D.Weston. 2004. The role of desorption for describing the bioavailability of select polycyclic aromatic hydrocarbon and polychlorinated biphenyl congeners for seven laboratory-spiked sediments. Environmental Toxicology and Chemistry, 23 (8): 1842-1851.

Kwon, T.-D., Fisher, S.W., Kim, G.W., Hwang, H. and J.-E. Kim. 2006. Trophic transfer and biotransformation of polychlorinated biphenyls in zebra mussel, round goby, and smallmouth bass in Lake Erie, USA. Environmental Toxicology and Chemistry, 25(4): 1068-1078.

Landrum, P.F., Robinson, S.D., Gossiaux, D.C., You, J., Lydy, M.J., Mitra, S. and T.E.M. Ten Hulscher. 2007. Predicting bioavailability of sediment-associated organic contaminants for Diporeia spp. and oligochaetes. Environmental Science and Technology, 41: 6442-6447.

Larivière, S. and L.R.Walton. 1998. Lontra canadensis. Mammalian Species (Publication of the American Society of Mammalogists), No. 587, 1-8.

Larivière, S. 1999. Mustela vison. Mammalian Species (Publication of the American Society of Mammalogists), No. 608, 1-9.

Leonards, P.E.G., Zierikzee, Y., Brinkman, U.A.T., Cofino, W.P., Van Straalen. N.M., and B. Van Hattum. 1997. Environmental Toxicology and Chemistry, 16(9): 1807-1815.

Liber, K., Gangl, J.A., Corry, T.D., Heinis, L.J and F.S. Stay. 1999. Lethality and bioaccumulation of 4-nonylphenol in bluegill sunfish in littoral enclosures. Environmental Toxicology and Chemistry, 18 (3): 394-400.

Liebig, M., Egler, P., Oehlmann, J. and T. Knacker. 2005. Bioaccumulation of 14C-17α-ethinylestradiol by the aquatic oligochaete Lumbriculus variegatus in spiked artificial sediment. Chemosphere, 59: 271-280.

Lin, H.-I, Berzins, D.W., Myers, L., George, W.J., Abdelghani, A. and K.H. Watanabe. 2004. A Bayesian approach to parameter estimation for a crayfish (Procambarus spp.) bioaccumulation model. Environmental Toxicology and Chemistry, 23 (9): 2259-2266.

Lotufo, G.R., Landrum, P.F., Gedeon, M.L., Tigue, E.A., and L.R. Herche. 2000. Comparative toxicity and toxicokinetics of DDT and its major metabolites in freshwater amphipods. Environmental Toxicology and Chemistry, 19 (2): 368-379.

Lotufo, G.R., Landrum, P.F., and M.L. Gedeon. 2001. Toxicity and bioaccumulation of DDT in freshwater amphipods in exposures to spiked sediments. Environmental Toxicology and Chemistry, 20 (4): 810-825.

Lu, X., Reible, D.D., Fleeger, J.W., and Y. Chai. 2003. Bioavailability of desorption-resistant phenanthrene to the oligochaete Ilyodrilus templetoni. Environmental Toxicology and Chemistry, 22 (1): 153-160.

Lürling, M. and E. Van Donk. 1997. Life history consequences for Daphnia pulex feeding on nutrient-limited phytoplankton. Freshwater Biology, 38, 693-709.

Marvin, C.H., Howell, E.T., Kloic, T.M. and E.J. Reiner. 2002. Polychlorinated dibenzo-p-dioxins and dioxinlike polychlorinated biphenyls in sediments and mussels at three sites in the lower Great Lakes, North America. Environmental Toxicology and Chemistry, 21 (9): 1908-1921.

McKee, M.J. and C.O. Knowles. 1987. Levels of protein, RNA, DNA, glycogen and lipid during growth and development of Daphnia magna Straus (Crustacea: Cladocera). Freshwater Biology, 18: 341-351.

Mineau, P., Collins, B.T. and A. Baril. 1996. On the use of scaling factors to improve interspecies extrapolation of acute toxicity in birds. Regulatory Toxicology and Pharmacology, 24: 24-29.

Miranda, L.E. and W.D. Hubbard. 1994. Length-dependent winter survival and lipid composition of age 0 largemouth bass in Bay Springs Reservoir, Mississippi. Transactions of the American Fisheries Society, 123: 80-87.

Mitra, G., Mukhopadhyay, P.K. and S.Ayyappan. 2007. Biochemical composition of zooplankton community grown in freshwater earthen ponds: nutritional implication in nursery rearing of fish larvae and early juveniles. Aquaculture, 272, 346-360.

Morrison, H.A., Gobas, F.A.P.C., Lazar, R., Whittle, D.M., and G.D. Haffner. 1997. Development and verification of a benthic/pelagic food web bioaccumulation model for PCB congeners in Western Lake Erie. Environmental Science and Technology, 31: 3267-3273.

Morrison, H.A., Whittle, D.M. and G.D. Haffner. 2000. The relative importance of species invasions and sediment disturbance in regulating chemical dynamics in western Lake Erie. Ecological Modeling, 125: 279-294.

Neumann, R.M. and B.R. Murphy. 1992. Seasonal relationships of relative weight to body composition in white crappie, Pomoxis annularis Rafinesque. Aquaculture and fisheries Management, 23: 243-251.

OECD. 1996. Guidelines for testing of chemicals: Bioconcentration: flow-through Fish test, 305. Organization for Economic Co-operation and Development. Adopted June 14, 1996.

Oliver, B.G. and A.J. Niimi. 1988. Trophodynamic analysis of polychlorinated biphenyl congeners and other chlorinated hydrocarbons in the Lake Ontario ecosystem. Environmental Science and Technology, 22: 388-397.

Page, L.M. and B.M. Burr. 1991. A field guide to freshwater fishes; North America, North of Mexico. The Peterson Field Guide Series. Houghton Mifflin Company, Boston.

Petersen, K.E. and T.L. Yates. 1980. Condylura crisata. Mammalian Species (Publication of the American Society of Mammalogists), No. 129, p. 1-4.

Price, D.J. and W.J. Birge. 2006. Use of sunfish and stoneroller minnows as real-time in situ biomonitors of PCB contamination in freshwater streams. Environmental Science and Technology, 40: 4388-4393.

Raven, P.H., Evert, R.F. and S.E. Eichhorn. 1999. Biology of Plants. Sixth Edition. W.H. Freeman and Company/Worth Publishers. New York.

Reid, F.A. 2006. A field guide to mammals of North America. 4th edition. Peterson Field Guides. Houghton Mifflin Company, Boston.

Rice, C.P. and D.S. White. 1987. PCB availability assessment of river dredging using caged clams and fish. Environmental Toxicology and Chemistry, 6: 259-274.

Sangster, J. 2007. LOGKOW© A databank of evaluated octanol-water partition coefficients (Log P). Available online at: http://logkow.cisti.nrc.ca/logkow/index.jsp. Accessed 29 January 2007.

Sethajintanin, D., Johnson, E.R., Loper, B.R. and K.A. Anderson. 2004. Bioaccumulation profiles of chemical contaminants in fish from the Lower Willamette River, Portland Harbor, Oregon. Archives of Environmental Contamination and Toxicology, 46: 114-123.

Shifrin, N.S. and S. W. Chisholm. 1981. Phytoplankton lipids: interspecific differences and effects of nitrate, silicate and light-dark cycles. Journal of Phycology 17(4): 374-384.

Sidwell, V. 1981. Chemical and nutritional composition of finfishes, whales, crustaceans, mollusks, and their products. National Oceanic and Atmospheric Administration Technical Memorandum, NMFS F/SEC-11.

Sladecek, V. and A. Sladeckova. 1963. Relationship between wet weight and dry weight of the periphyton. Limnology and Oceanography, 8 (2): 309-311.

Smithsonian. 2008. North American Mammals. Smithsonian Museum of Natural History. Accessed online 22-August-2008 at: http://www.mnh.si.edu/mna/search_name.cfm.

Spacie, A., L. S. McCarty and G. M. Rand. 1995. Bioaccumulation and bioavailability in multiphase systems. In G. M. Rand, editor, Fundamentals of Aquatic Toxicology: Effects, Environmental Fate and Risk Assessment 2nd Edition. Taylor and Francis, Washington DC.

Stange, K. and D.L. Swackhamer. 1994. Factors affecting phytoplankton species-specific differences in accumulation of 40 polychlorinated biphenyls (PCBs). Environmental Toxicology and Chemistry, 13 (11): 1849-1860.

USDA. 2005. USDA National Nutrient Database for Standard Reference, Release 18. Nutrient data laboratory Home Page. United States Department of Agriculture, Agricultural Research Service. Available online at: http://www.ars.usda.gov/main/site_main.htm?modecode=12-35-45-00.

USEPA. 1993. Wildlife Exposure factors handbook. United States Environmental Protection Agency. Office of Research and Development. EPA/600/R-93/187.

USEPA. 1995. Great Lakes Water Quality Initiative Technical Support Document for the Procedure to Determine Bioaccumulation Factors. United States Environmental Protection Agency. Office of Water. Washington, DC. EPA/820/B-95/005.

USEPA. 1996. Ecological effects test guidelines: OPPTS 850.1730, Fish BCF. United States Environmental Protection Agency. Prevention, Pesticides and Toxic Substances. EPA 712-C-96-129.

USEPA. 2000. Methodology for Deriving Ambient Water Quality Criteria for the Protection of Human Health (2000). United States Environmental Protection Agency. Office of Water, Washington, DC. EPA-822-B-00-004.

USEPA. 2002. Guidance for Selecting Input Parameters in Modeling the Environmental Fate and Transport of Pesticides, Version II. US Environmental Protection Agency, Washington DC. Online at: http://www.epa.gov/oppefed1/models water/input_guidance2_28_02.htm.

USEPA. 2003. Methodology for Deriving Ambient Water Quality Criteria for the Protection of Human Health (2000). Technical Support Document Volume 2: Development of National Bioaccumulation Factors. United States Environmental Protection Agency. Office of Water, Washington, DC. EPA-822-R-03-030.

USEPA. 2004a. Overview of the Ecological Risk Assessment Process in the Office of Pesticide Programs. U.S. Environmental Protection Agency, Office of Prevention, Pesticides and Toxic Substances, Office of Pesticide Programs, Washington DC. 100 pp. January 23, 2004.

USEPA. 2004b. Exposure Analysis Modeling System (EXAMS): User Manual and System Documentation. EPA/600/R-00/081, Revision G (May 2004). U.S. Environmental Protection Agency, National Exposure Research Laboratory, Athens, Georgia.

USEPA. 2008a. User's Guide: T-REX Version 1.4.1 (Terrestrial Residue Exposure model). United States Environmental Protection Agency. Environmental Fate and Effects Division.

USEPA. 2008b. White paper on methods for assessing ecological risks of pesticides with persistent, bioaccumulative and toxic characteristics. Submitted to the FIFRA Scientific Advisory Panel for review and comment. United States Environmental Protection Agency, Environmental Fate and Effects Division.

USEPA. 2008c. Terms of Environment: Glossary, Abbreviations and Acronyms. United States Environmental Protection Agency. Accessed 8-September-2008, at: http://www.epa.gov/OCEPATERMS/.

USEPA. 2009. EPI Suite™ v4.0. United States Environmental Protection Agency. Available for download at: http://www.epa.gov/oppt/exposure/pubs/episuitedl.htm.

USFWS. 1993. Endangered and Threatened Wildlife and Plants: Designation of critical Habitat for the Silver Rice Rat. United States Fish and Wildlife Service. 50 CFR Part 17.

USFWS. 2008. Endangered Species Program. United States Fish and Wildlife Program. Accessed online 23-July-2008. http://www.fws.gov/endangered/wildlife.html#Species

USGS. 2008a. Dissolved oxygen saturation tables. United States Geological Survey. Available online at: http://water.usgs.gov/software/DOTABLES/.

USGS. 2008b. National Water-Quality Assessment Program. United States Geological Survey. http://water.usgs.gov/nawqa/.

Van Haelst, A.G., Zhao, Q., Van Der Wielen, F.W.M., Govers, H.A.J. and P. De Voogt. 1996. Determination of bioconcentration factors of eight tetrachlorobenzyltoluenes in the zebra mussel Dreissena polymorpha. Ecotoxicology and Environmental Safety, 34: 35-42.

Vidal, M.-L., Bassères, A. and J.-F. Narbonne. 2002. Seasonal variations of pollution biomarkers in two populations of Corbicula fluminea (Müller). Comparative Biology and Physiology Part C, 131: 133-151.

Vijverberg, J. and T.H. Frank. 1976. The chemical composition and energy contents of copepods and cladocerans in relation to their size. Freshwater Biology, 6: 333-345.

Wetzel, R.G. 1983. Limnology. Second Edition. Saunders College Publishing, Harcourt Brace College Publishers, Fort Worth.

White, P.A., Rasmussen, J.B. and C. Blaise. 1998. Genotoxic substances in the St. Lawrence system II: extracts of fish and macroinvertebrates from the St. Lawrence and Saguenay Rivers, Canada. Environmental Toxicology and Chemistry, 17 (2): 304-316.

Wolfe, J.L. 1982. Oryzomys palustris. Mammalian Species (Publication of the American Society of Mammalogists), No. 176, p. 1-5.

Wright, J.C. 1958. The limnology of Canyon Ferry Reservoir, I. phytoplankton-zooplankton relationships in the euphotic zone during September and October 1956. Limnology and Oceanography, 3 (2): 150-159.

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