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  2. Great Lakes Monitoring

2019 Surveys Conducted on Lake Guardian

Highlights

EPA Deploys Autonomous Underwater Vehicle to Assess Lake Erie’s Dissolved Oxygen Levels

Related Information
  • Cooperative Science and Monitoring Initiative
  • U.S. EPA's Research Vessel Lake Guardian

In 2019, the R/V Lake Guardian supported five Lake Erie CSMI surveys. This page presents summaries of the science and participating partners:

On this page:

  • Lower Food Web Surveys
  • Benthos Survey 
  • Lower Food Web Contaminants Survey
  • ​Harmful Algal Blooms/Hypoxia Survey​

Lower Food Web Surveys

Two lower food web CSMI surveys were conducted on Lake Erie using the R/V Lake Guardian in May and September 2019. These surveys addressed the Lake Erie Partnership’s Changing Food Web and In-lake Eutrophication science priorities.

The scientific objective of these surveys was to determine how water quality, hypoxia, and the pelagic lower food web vary spatially and seasonally in Lake Erie. As Lake Erie is a highly variable ecosystem, intensive surveys are required to understand the mechanisms controlling harmful algal blooms (HABs), hypoxia, and the lower food web.

Map of Sites sampled to monitor Lake Erie’s lower food web
Sites sampled to monitor Lake Erie’s lower food web.
A total of 22 total stations were sampled during day and night over 3-4 days. The following samples were collected and analyzed at all sites or a subset of sites:
  • water quality nutrients
  • phytoplankton
  • zooplankton
  • larval fish
  • sediment

Samples were also collected to perform the following laboratory experiments:

  • primary productivity experiments
  • zooplankton nutrient excretion experiments
Multiple technical instruments were deployed to measure the following optical parameters for validating water quality and HABs remote sensing models:
  • inherent optical properties
  • apparent optical properties

Numerous partners were involved on these surveys, including:

  • US EPA Great Lakes National Program Office
  • US EPA Office of Research and Development Mid-Continent Ecology Division
  • University of Michigan Cooperative Institute for Great Lakes Research
  • Michigan Technological Research Institute
  • The Ohio State University
  • University of Toledo
  • Cornell University

Benthos Survey

 
Map of Sites sampled to monitor and map Lake Erie’s benthic organisms
Sites sampled to monitor and map Lake Erie’s benthic organisms.
As part of the 2019 Cooperative Science and Monitoring Initiative (CSMI), teams of Great Lakes Restoration Initiative (GLRI) partners aboard the EPA research vessel Lake Guardian from July 15-23 monitored and mapped the distribution of bottom-dwelling organisms, known as benthos, to better understand the health of Lake Erie’s lower food web.
 
Benthic organisms are critical components of Lake Erie’s food web. They provide food for native fish such as yellow perch, white perch, burbot, white bass and lake whitefish in addition to non-native species including round goby, rainbow smelt and alewife. Benthic organisms include amphipods, which are small crustaceans, mollusks, annelid worms, and insect larvae.
 
Collecting data on the composition and health of the benthic community is essential to understanding how energy and nutrients are cycled throughout the lake, and whether changes to those cycles are occurring. Benthic organisms are also important indicators of ecosystem health, as many benthic species are sensitive to pollution.
Photo of marine technician collecting sediment from a Ponar sampler
Marine technician collecting sediment from a Ponar sampler.
On the 2019 CSMI benthos survey, scientists collected underwater video footage and “grabbed” samples of the lake bottom sediment via a Ponar grab. Videos and samples allow the research team to estimate the presence and abundance of bottom-dwelling species, with a special emphasis on the distribution of invasive Quagga mussels. They compared 2019 data to results from past surveys to understand how the Lake Erie benthic community has changed over time and determine if Quagga mussel abundance, growth and health in Lake Erie are changing at different rates than in the other Great Lakes.

The teams conducting this research are made up of several GLRI partners:

  •     Environmental Protection Agency
  •     National Oceanic and Atmospheric Administration
  •     Buffalo State College
  •     Wright State University
  •     Cornell University
  •     Oak Ridge Institute for Science and Education
  •     Cooperative Institute for Great Lakes Research

Lower Food Web Contaminants Survey

Photo of Preparing lists and labels for contaminant sampling
Preparing lists and labels for contaminant sampling. 

Contaminants in the aquatic ecosystem can bioaccumulate through the food chain and potentially become present at higher concentrations in organisms  at the top of the food chain. To better understand contaminant cycling in the Great Lakes open water food web, researchers from Clarkson University, EPA, USGS, NOAA GLERL, SUNY-Fredonia, and SUNY-Oswego assessed the biomagnification of legacy contaminants and chemicals of emerging concern in the lower food web in support of Lake Erie CSMI. Sampling was conducted at the Western Basin and Eastern Basin Great Lakes Fish Monitoring and Surveillance Program (GLFMSP) sites in Lake Erie in June 2019. This CSMI survey sampled water, sediment, phytoplankton, zooplankton, and benthos for contaminant analyses, thus targeting the major components of the Lake Erie lower food web.

Results from this survey supplement EPA’s long-term GLFMSP. Annual monitoring through the GLFMSP collects top predator fish from fixed sampling sites in each Great Lake. These fish are aged then analyzed for legacy and emerging contaminants in whole fish.


Harmful Algal Blooms/Hypoxia Survey

The scientific objective of the survey is to examine how harmful algal blooms (HABS) and bottom hypoxia (lack of oxygen) are driving change in the structure, function and dynamics of Lake Erie’s food webs. The factors will be considered both separately and combined.

This research will examine how the presence of HABs and hypoxia can affect the quantity and quality of prey available to the ecosystem’s top predators (walleye and yellow perch). It will help us understand how toxins produced by HABs, such as microcystin, are distributed throughout the water column, as well as within the food web.

HABs/hypoxia cruises were conducted July and August 2019 using the RV Lake Explorer II (operated by the U.S. EPA Office of Research and Development) and the CCGS Limnos (operated by Environment and Climate Change Canada and Department of Fisheries and Oceans, Canada).

Photo of Launching the rosette water sampler at night in Lake Erie
Launching the rosette water sampler at night in Lake Erie.
This research involves intensively sampling inside and outside of:
  1. HABs
  2. hypoxic zones
  3. areas of combined HABs and hypoxia

Here are the questions this research is designed to answer:

  1. How does the composition of microbes, phytoplankton, zooplankton and fish differ among areas inside and outside of HABs, hypoxic zones and areas of combined HABs and hypoxia?
  2. How does the movement, behavior and distribution of higher consumers (zooplankton and fish) vary in the presence of one or both stressors? For example:
    1. Are these organisms “squeezed” between surface-dominated HABs and bottom hypoxia?
    2. Is diel vertical migration, or migration that happens between day and night, disrupted?
    3. Do higher consumers actively use HABs as a refuge from predation, or actively avoid them?)
  3. Do production and energy transfer between primary producers (microbes, algae), secondary consumers (zooplankton), and tertiary consumers (planktivorous fish) differ among areas?
  4. Does the quality of higher consumers decrease in the presence of one or both stressors?
  5. What role does food web transfer play in the accumulation of cyanotoxins (microcystin) in the edible tissue of fish?
Survey partners include:
  • U.S. EPA
  • Illinois-Indiana Sea Grant
  • Ohio State University
  • Department of Fisheries and Oceans, Canada
Map of General sampling plan to monitor Lake Erie’s food web in hypoxic, HAB, and hypoxic + HABs regions
Targeted Lake Erie sampling zones for food web assessments in hypoxic areas, HAB areas, and areas where hypoxia and HABs overlapped

Great Lakes Monitoring

  • Great Lakes Monitoring
    • Great Lakes Water Quality Monitoring Program
    • Integrated Atmospheric Deposition Network
    • Great Lakes Biology Monitoring Program
    • Great Lakes Fish Monitoring and Surveillance Program
  • EPA's Research Vessel Lake Guardian
  • Great Lakes Coastal Wetland Monitoring Program
    • Why Monitoring of the Great Lakes Coastal Wetlands is Important
    • How the Great Lakes Coastal Wetlands are Monitored
    • Where Great Lakes Coastal Wetlands Occur
    • Great Lakes CWMP Results and Major Findings
    • How the CWMP Data are Being Used
  • Cooperative Science and Monitoring Initiative (CSMI)
    • About Cooperative Science and Monitoring Initiative (CSMI)
    • 2021 Surveys Conducted on Lake Guardian
    • 2019 Surveys Conducted on Lake Guardian
Contact Us About Great Lakes Monitoring
Contact Us to ask a question, provide feedback, or report a problem.
Last updated on May 6, 2025
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